Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN05444145_105246 | Not Available | Positive | 2236397 - 2236693 | 10682.7 |
| Nucleotidyltransferase | SAMN05444145_105247 | Not Available | Positive | 2236690 - 2237529 | 31175.9 |
| Hypothetical protein | SAMN05444145_105248 | Not Available | Positive | 2237522 - 2238013 | 18792.8 |
| Tail protein | SAMN05444145_105249 | Not Available | Positive | 2238015 - 2238938 | 33981.0 |
| hypothetical protein | SAMN05444145_105250 | Not Available | Positive | 2238951 - 2239325 | 13788.0 |
| Tail fiber protein | SAMN05444145_105251 | Not Available | Positive | 2239338 - 2240234 | 31169.2 |
| Fibre protein | SAMN05444145_105252 | Not Available | Positive | 2240250 - 2241146 | 32182.2 |
| Putative tail fiber assembly protein | SAMN05444145_105253 | Not Available | Positive | 2241161 - 2241490 | 12604.8 |
| Hypothetical protein | SAMN05444145_105254 | Not Available | Positive | 2241490 - 2241684 | 6765.12 |
| Hypothetical protein | SAMN05444145_105255 | Not Available | Positive | 2242102 - 2242308 | 7113.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
