Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-carboxymuconolactone decarboxylase | SAMN05444145_101244 | Not Available | Positive | 310953 - 312071 | 40161.8 |
| aldo/keto reductase | SAMN05444145_101245 | Not Available | Positive | 312085 - 312927 | 31689.8 |
| nadph-dependent fmn reductase | SAMN05444145_101246 | Not Available | Positive | 312933 - 313472 | 19884.1 |
| 4fe-4s binding domain-containing protein | SAMN05444145_101247 | Not Available | Positive | 313500 - 314981 | 54714.1 |
| hypothetical protein | SAMN05444145_101248 | Not Available | Positive | 314994 - 316376 | 51953.0 |
| putative efflux protein, mate family | SAMN05444145_101249 | Not Available | Positive | 316479 - 317843 | 49284.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444145_101250 | Not Available | Positive | 317879 - 318457 | 21748.0 |
| outer membrane protein, multidrug efflux system | SAMN05444145_101251 | Not Available | Negative | 318466 - 319863 | 51678.1 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN05444145_101252 | Not Available | Negative | 319860 - 322958 | 113417.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444145_101253 | Not Available | Negative | 322965 - 324230 | 46750.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
