Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lruc domain-containing protein | SAMN05444145_101234 | Not Available | Positive | 296091 - 298472 | 84974.4 |
| transcriptional regulator, tetr family | SAMN05444145_101235 | Not Available | Negative | 298597 - 299175 | 22483.2 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444145_101236 | Not Available | Negative | 299175 - 300539 | 49426.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444145_101237 | Not Available | Negative | 300543 - 303725 | 115042.0 |
| membrane fusion protein, multidrug efflux system | SAMN05444145_101238 | Not Available | Negative | 303729 - 304901 | 41206.0 |
| arac-type dna-binding protein | SAMN05444145_101239 | Not Available | Positive | 305071 - 305919 | 32690.2 |
| fructose-bisphosphate aldolase | SAMN05444145_101240 | Not Available | Positive | 306012 - 307064 | 38091.3 |
| d-lactate dehydrogenase | SAMN05444145_101241 | Not Available | Positive | 307078 - 308097 | 37676.9 |
| phosphoglycerate mutase | SAMN05444145_101242 | Not Available | Positive | 308100 - 308846 | 28167.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05444145_101243 | Not Available | Positive | 309081 - 310838 | 63826.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
