Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nfed-like c-terminal, partner-binding | SAMN05444145_101224 | Not Available | Positive | 283888 - 284358 | 17001.3 |
| uncharacterized protein yqfa, upf0365 family | SAMN05444145_101225 | Not Available | Positive | 284368 - 285339 | 34746.7 |
| s-formylglutathione hydrolase frmb | SAMN05444145_101226 | Not Available | Positive | 285407 - 286957 | 57985.8 |
| zn-finger domain of cdgsh type-containing protein | SAMN05444145_101227 | Not Available | Negative | 286994 - 287761 | 28380.4 |
| succinogenes major domain (fib_succ_major) | SAMN05444145_101228 | Not Available | Positive | 287986 - 289455 | 52768.4 |
| predicted arabinose efflux permease, mfs family | SAMN05444145_101229 | Not Available | Positive | 289556 - 290758 | 43932.2 |
| major paralogous domain-containing protein | SAMN05444145_101230 | Not Available | Positive | 290831 - 292132 | 44861.6 |
| homoserine dehydrogenase | SAMN05444145_101231 | Not Available | Negative | 292175 - 293383 | 45411.7 |
| homoserine o-acetyltransferase | SAMN05444145_101232 | Not Available | Negative | 293397 - 294410 | 37282.2 |
| o-acetylhomoserine sulfhydrylase | SAMN05444145_101233 | Not Available | Negative | 294410 - 295696 | 46517.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
