Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN05444145_101214 | Not Available | Positive | 271399 - 272085 | 25726.3 |
| phosphoglycerol transferase mdob | SAMN05444145_101215 | Not Available | Negative | 272144 - 273889 | 66941.1 |
| methionyl-trna formyltransferase | SAMN05444145_101216 | Not Available | Negative | 273967 - 274938 | 35616.2 |
| gtp cyclohydrolase ii /3,4-dihydroxy-2-butanone 4-phosphate synthase | SAMN05444145_101217 | Not Available | Negative | 274942 - 276165 | 45052.4 |
| lipopolysaccharide export system permease protein | SAMN05444145_101218 | Not Available | Negative | 276140 - 277642 | 56781.5 |
| zinc transport system permease protein | SAMN05444145_101219 | Not Available | Negative | 277639 - 278472 | 29099.5 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN05444145_101220 | Not Available | Positive | 278642 - 279940 | 47692.2 |
| hypothetical protein | SAMN05444145_101221 | Not Available | Positive | 280045 - 280839 | 29461.1 |
| trk system potassium uptake protein trkh | SAMN05444145_101222 | Not Available | Positive | 280844 - 282289 | 52648.7 |
| hypothetical protein | SAMN05444145_101223 | Not Available | Positive | 282298 - 283845 | 57859.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
