Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epoxyqueuosine reductase | SAMN05444145_11071 | Not Available | Positive | 3183398 - 3184333 | 33988.4 |
| hypothetical protein | SAMN05444145_11072 | Not Available | Negative | 3184436 - 3185395 | 34226.8 |
| trna(adenine34) deaminase | SAMN05444145_11073 | Not Available | Negative | 3185495 - 3185941 | 15981.2 |
| aspartyl-trna synthetase | SAMN05444145_11074 | Not Available | Positive | 3186267 - 3188021 | 66468.7 |
| hypothetical protein | SAMN05444145_11075 | Not Available | Negative | 3188108 - 3188416 | 10869.8 |
| recombination protein mgsa | SAMN05444145_11076 | Not Available | Positive | 3188733 - 3190007 | 47203.6 |
| hypothetical protein | SAMN05444145_11077 | Not Available | Negative | 3190060 - 3191544 | 52017.1 |
| hypothetical protein | SAMN05444145_11078 | Not Available | Negative | 3191550 - 3191711 | 5779.62 |
| hypothetical protein | SAMN05444145_11079 | Not Available | Positive | 3191831 - 3192343 | 19102.2 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN05444145_11080 | Not Available | Positive | 3192736 - 3195189 | 91750.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
