Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444145_11061 | Not Available | Positive | 3169029 - 3169610 | 21961.4 |
| protein of unknown function | SAMN05444145_11062 | Not Available | Positive | 3169623 - 3171047 | 53770.3 |
| major fimbrial subunit protein (fima) | SAMN05444145_11063 | Not Available | Positive | 3171137 - 3172885 | 64364.9 |
| fimbrillin-a associated anchor protein mfa1 and mfa2 | SAMN05444145_11064 | Not Available | Positive | 3173136 - 3174203 | 41215.4 |
| hypothetical protein | SAMN05444145_11065 | Not Available | Positive | 3174360 - 3175913 | 58881.7 |
| hypothetical protein | SAMN05444145_11066 | Not Available | Positive | 3175949 - 3179050 | 116474.0 |
| hypothetical protein | SAMN05444145_11067 | Not Available | Positive | 3179239 - 3180147 | 34763.5 |
| hypothetical protein | SAMN05444145_11068 | Not Available | Positive | 3180162 - 3180278 | 4339.34 |
| phage integrase sam-like domain-containing protein | SAMN05444145_11069 | Not Available | Negative | 3180501 - 3181043 | 20815.0 |
| long-chain acyl-coa synthetase | SAMN05444145_11070 | Not Available | Negative | 3181631 - 3183298 | 61670.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
