Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN05444145_11051 | Not Available | Positive | 3158443 - 3158685 | 8695.07 |
| hypothetical protein | SAMN05444145_11052 | Not Available | Positive | 3158716 - 3159747 | 38338.3 |
| hypothetical protein | SAMN05444145_11053 | Not Available | Positive | 3159818 - 3160276 | 17106.7 |
| protein of unknown function | SAMN05444145_11054 | Not Available | Positive | 3160280 - 3161149 | 32750.1 |
| outer membrane cobalamin receptor protein | SAMN05444145_11055 | Not Available | Positive | 3161146 - 3163143 | 76023.8 |
| chaperone of endosialidase | SAMN05444145_11056 | Not Available | Positive | 3163604 - 3163876 | 10019.0 |
| hypothetical protein | SAMN05444145_11057 | Not Available | Positive | 3163917 - 3164741 | 31170.6 |
| hypothetical protein | SAMN05444145_11058 | Not Available | Positive | 3164845 - 3165738 | 33497.8 |
| hypothetical protein | SAMN05444145_11059 | Not Available | Negative | 3166657 - 3166881 | 8965.03 |
| site-specific recombinase xerd | SAMN05444145_11060 | Not Available | Positive | 3167342 - 3168589 | 47298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
