Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | SAMN05444145_101204 | Not Available | Negative | 263091 - 263654 | 21159.3 |
| tigr00255 family protein | SAMN05444145_101205 | Not Available | Negative | 263655 - 264515 | 32558.3 |
| phosphoserine aminotransferase apoenzyme | SAMN05444145_101206 | Not Available | Positive | 264710 - 265783 | 39855.9 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444145_101207 | Not Available | Positive | 265787 - 266788 | 35863.5 |
| uncharacterized conserved protein, duf1015 family | SAMN05444145_101208 | Not Available | Positive | 266855 - 268102 | 47355.1 |
| hypothetical protein | SAMN05444145_101209 | Not Available | Negative | 268154 - 268321 | 5736.95 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit delta | SAMN05444145_101210 | Not Available | Positive | 268514 - 268741 | 7848.59 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN05444145_101211 | Not Available | Positive | 268745 - 269839 | 39624.0 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN05444145_101212 | Not Available | Positive | 269846 - 270613 | 27752.5 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | SAMN05444145_101213 | Not Available | Positive | 270618 - 271163 | 19986.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
