Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_11031 | Not Available | Negative | 3134932 - 3135387 | 16633.7 |
| transcriptional regulator, arac family | SAMN05444145_11032 | Not Available | Negative | 3135458 - 3136312 | 31837.4 |
| hypothetical protein | SAMN05444145_11033 | Not Available | Negative | 3136309 - 3136596 | 9997.0 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05444145_11034 | Not Available | Negative | 3136629 - 3137513 | 33601.8 |
| putative protease | SAMN05444145_11035 | Not Available | Negative | 3137513 - 3139348 | 66626.2 |
| seryl-trna synthetase | SAMN05444145_11036 | Not Available | Positive | 3139425 - 3140696 | 47596.0 |
| 4fe-4s binding domain-containing protein | SAMN05444145_11037 | Not Available | Positive | 3140746 - 3140913 | 5567.6 |
| maltose o-acetyltransferase | SAMN05444145_11038 | Not Available | Positive | 3140987 - 3141568 | 21274.7 |
| putative endonuclease | SAMN05444145_11039 | Not Available | Negative | 3141871 - 3142155 | 11052.3 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN05444145_11040 | Not Available | Negative | 3142228 - 3143334 | 40438.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
