Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_11021 | Not Available | Positive | 3121744 - 3124611 | 107851.0 |
| nitroreductase | SAMN05444145_11022 | Not Available | Negative | 3124660 - 3125517 | 31642.8 |
| mfs transporter, nhs family, xanthosine permease | SAMN05444145_11023 | Not Available | Negative | 3125527 - 3126768 | 45432.5 |
| Trna-gln | Not Available | Not Available | Positive | 3126906 - 3126976 | Not Available |
| hypothetical protein | SAMN05444145_11025 | Not Available | Negative | 3127435 - 3128400 | 36448.4 |
| peptidyl-dipeptidase dcp | SAMN05444145_11026 | Not Available | Negative | 3128541 - 3130637 | 78141.9 |
| peptidyl-dipeptidase dcp metallo peptidase. merops family m03a | SAMN05444145_11027 | Not Available | Negative | 3130704 - 3132887 | 83399.6 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN05444145_11028 | Not Available | Positive | 3132967 - 3133698 | 27072.7 |
| chromate transporter | SAMN05444145_11029 | Not Available | Positive | 3133837 - 3134382 | 19542.9 |
| chromate transporter | SAMN05444145_11030 | Not Available | Positive | 3134379 - 3134951 | 20728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
