Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_109127 | Not Available | Positive | 3083696 - 3084112 | 15070.4 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05444145_109128 | Not Available | Positive | 3084181 - 3086547 | 88478.2 |
| copper chaperone copz | SAMN05444145_109129 | Not Available | Positive | 3086593 - 3086907 | 11057.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05444145_109130 | Not Available | Negative | 3087133 - 3087855 | 26781.8 |
| hypothetical protein | SAMN05444145_109131 | Not Available | Positive | 3088186 - 3089133 | 34645.6 |
| mfs transporter, dha3 family, macrolide efflux protein | SAMN05444145_109132 | Not Available | Negative | 3089181 - 3090389 | 43064.9 |
| lsu ribosomal protein l20p | SAMN05444145_109133 | Not Available | Negative | 3090463 - 3090807 | 12722.9 |
| lsu ribosomal protein l35p | SAMN05444145_109134 | Not Available | Negative | 3090899 - 3091093 | 7290.14 |
| tpr repeat | SAMN05444145_109135 | Not Available | Positive | 3091225 - 3094029 | 107153.0 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN05444145_109136 | Not Available | Positive | 3094066 - 3094737 | 24257.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
