Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase dead | SAMN05444145_109117 | Not Available | Positive | 3069455 - 3071413 | 72839.6 |
| protein of unknown function | SAMN05444145_109118 | Not Available | Positive | 3071596 - 3073800 | 83785.2 |
| ctp synthase | SAMN05444145_109119 | Not Available | Positive | 3073812 - 3075434 | 59547.9 |
| yidc/oxa1 family membrane protein insertase | SAMN05444145_109120 | Not Available | Positive | 3075615 - 3077561 | 73554.8 |
| hypothetical protein | SAMN05444145_109121 | Not Available | Positive | 3077661 - 3078515 | 31843.8 |
| s-formylglutathione hydrolase frmb | SAMN05444145_109122 | Not Available | Negative | 3078553 - 3079398 | 31480.5 |
| sam-dependent methyltransferase | SAMN05444145_109123 | Not Available | Negative | 3079402 - 3080601 | 44586.9 |
| 3'-5' exonuclease | SAMN05444145_109124 | Not Available | Negative | 3080598 - 3081206 | 22972.1 |
| atp-dependent dna helicase recq | SAMN05444145_109125 | Not Available | Negative | 3081266 - 3083224 | 73132.7 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN05444145_109126 | Not Available | Positive | 3083430 - 3083699 | 9843.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
