Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase | SAMN05444145_109107 | Not Available | Positive | 3058718 - 3059137 | 15022.9 |
| pyruvate kinase | SAMN05444145_109108 | Not Available | Positive | 3059158 - 3060633 | 54692.1 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05444145_109109 | Not Available | Positive | 3060645 - 3062105 | 53189.7 |
| butyrate kinase | SAMN05444145_109110 | Not Available | Negative | 3062137 - 3063204 | 38470.8 |
| phosphate butyryltransferase | SAMN05444145_109111 | Not Available | Negative | 3063250 - 3064158 | 32588.9 |
| acetate kinase | SAMN05444145_109112 | Not Available | Negative | 3064194 - 3065396 | 43328.1 |
| crcb protein | SAMN05444145_109113 | Not Available | Negative | 3065603 - 3065977 | 12686.8 |
| glutamate-5-semialdehyde dehydrogenase | SAMN05444145_109114 | Not Available | Negative | 3066100 - 3067356 | 44562.1 |
| glutamate 5-kinase | SAMN05444145_109115 | Not Available | Negative | 3067358 - 3068452 | 39062.9 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05444145_109116 | Not Available | Negative | 3068657 - 3069328 | 25047.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
