Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ synthase (glutamine-hydrolysing) | SAMN05444145_10987 | Not Available | Positive | 3033944 - 3035524 | 57926.3 |
| positive regulator of sigma(e), rsec/mucc | SAMN05444145_10988 | Not Available | Positive | 3035529 - 3035948 | 14437.7 |
| electron transport complex, rnfabcdge type, b subunit | SAMN05444145_10989 | Not Available | Positive | 3035948 - 3036892 | 32532.8 |
| electron transport complex protein rnfc | SAMN05444145_10990 | Not Available | Positive | 3036909 - 3038258 | 47449.7 |
| electron transport complex protein rnfd | SAMN05444145_10991 | Not Available | Positive | 3038439 - 3039407 | 33915.8 |
| electron transport complex protein rnfg | SAMN05444145_10992 | Not Available | Positive | 3039421 - 3040095 | 22812.1 |
| electron transport complex protein rnfe | SAMN05444145_10993 | Not Available | Positive | 3040109 - 3040672 | 19556.0 |
| electron transport complex protein rnfa | SAMN05444145_10994 | Not Available | Positive | 3040675 - 3041253 | 20624.5 |
| fecr family protein | SAMN05444145_10995 | Not Available | Positive | 3041566 - 3042525 | 35789.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10996 | Not Available | Positive | 3042584 - 3045901 | 122852.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
