Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase | SAMN05444145_10977 | Not Available | Positive | 3024184 - 3025029 | 32002.0 |
| hypothetical protein | SAMN05444145_10978 | Not Available | Positive | 3025142 - 3026371 | 47243.6 |
| hypothetical protein | SAMN05444145_10979 | Not Available | Negative | 3026402 - 3026656 | 8798.71 |
| trk system potassium uptake protein trka | SAMN05444145_10980 | Not Available | Positive | 3026785 - 3028122 | 48779.2 |
| gh3 auxin-responsive promoter | SAMN05444145_10981 | Not Available | Positive | 3028224 - 3029612 | 53351.4 |
| deoxyadenosine/deoxycytidine kinase | SAMN05444145_10982 | Not Available | Positive | 3029630 - 3030247 | 23872.9 |
| 16s rrna c967 or c1407 c5-methylase, rsmb/rsmf family | SAMN05444145_10983 | Not Available | Positive | 3030250 - 3031626 | 49503.9 |
| dna-binding transcriptional regulator, merr family | SAMN05444145_10984 | Not Available | Positive | 3031629 - 3032192 | 21174.4 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN05444145_10985 | Not Available | Positive | 3032203 - 3032988 | 28691.3 |
| hypothetical protein | SAMN05444145_10986 | Not Available | Positive | 3033012 - 3033773 | 28891.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
