Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide dehydrogenase | SAMN05444145_101194 | Not Available | Negative | 252416 - 253792 | 48679.0 |
| dipeptidase | SAMN05444145_101195 | Not Available | Negative | 253792 - 255486 | 63019.3 |
| protein of unknown function | SAMN05444145_101196 | Not Available | Positive | 255713 - 256936 | 42958.5 |
| hypothetical protein | SAMN05444145_101197 | Not Available | Positive | 257008 - 257685 | 25248.7 |
| pyrroline-5-carboxylate reductase | SAMN05444145_101198 | Not Available | Positive | 257745 - 258530 | 27250.4 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN05444145_101199 | Not Available | Negative | 258707 - 259486 | 29992.8 |
| lysm domain-containing protein | SAMN05444145_101200 | Not Available | Negative | 259517 - 260719 | 44865.4 |
| protein of unknown function | SAMN05444145_101201 | Not Available | Negative | 260726 - 261298 | 21404.8 |
| d-alanine-d-alanine ligase | SAMN05444145_101202 | Not Available | Negative | 261295 - 262278 | 35955.1 |
| nicotinate-nucleotide adenylyltransferase | SAMN05444145_101203 | Not Available | Negative | 262280 - 263077 | 30081.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
