Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted zn-dependent peptidase | SAMN05444145_10967 | Not Available | Negative | 3013378 - 3014616 | 46490.0 |
| hypothetical protein | SAMN05444145_10968 | Not Available | Positive | 3015067 - 3015189 | 4879.37 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN05444145_10969 | Not Available | Positive | 3015603 - 3019136 | 128670.0 |
| hypothetical protein | SAMN05444145_10970 | Not Available | Positive | 3019363 - 3020208 | 30859.1 |
| heat shock protein hslj | SAMN05444145_10971 | Not Available | Positive | 3020424 - 3020855 | 16003.4 |
| large subunit ribosomal protein l27 | SAMN05444145_10972 | Not Available | Negative | 3021121 - 3021381 | 9102.91 |
| lsu ribosomal protein l21p | SAMN05444145_10973 | Not Available | Negative | 3021403 - 3021714 | 11685.4 |
| hypothetical protein | SAMN05444145_10974 | Not Available | Positive | 3021869 - 3022237 | 13872.4 |
| hypothetical protein | SAMN05444145_10975 | Not Available | Positive | 3022234 - 3023181 | 35283.0 |
| hypothetical protein | SAMN05444145_10976 | Not Available | Positive | 3023178 - 3024098 | 33086.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
