Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| release factor glutamine methyltransferase | SAMN05444145_10957 | Not Available | Negative | 3002928 - 3003767 | 30745.7 |
| chorismate synthase | SAMN05444145_10958 | Not Available | Negative | 3003767 - 3004741 | 34293.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN05444145_10959 | Not Available | Negative | 3004754 - 3005998 | 44741.5 |
| lipopolysaccharide export system atp-binding protein | SAMN05444145_10960 | Not Available | Negative | 3006002 - 3006796 | 29744.8 |
| atp-dependent dna helicase recq | SAMN05444145_10961 | Not Available | Positive | 3006906 - 3009098 | 82126.8 |
| hypothetical protein | SAMN05444145_10962 | Not Available | Positive | 3009237 - 3009464 | 8623.87 |
| hypothetical protein | SAMN05444145_10963 | Not Available | Positive | 3009576 - 3009815 | 9382.89 |
| hypothetical protein | SAMN05444145_10964 | Not Available | Negative | 3009885 - 3011201 | 49952.1 |
| dimethyladenosine transferase | SAMN05444145_10965 | Not Available | Positive | 3011356 - 3012144 | 29567.8 |
| predicted zn-dependent peptidase | SAMN05444145_10966 | Not Available | Negative | 3012113 - 3013381 | 47042.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
