Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cro/c1-type hth dna-binding domain-containing protein | SAMN05444145_10947 | Not Available | Negative | 2993526 - 2993765 | 8775.65 |
| pp_02314 | SAMN05444145_10948 | Not Available | Negative | 2994036 - 2995238 | Not Available |
| 16s rrna processing protein rimm | SAMN05444145_10949 | Not Available | Negative | 2995240 - 2995755 | 19314.7 |
| ssu ribosomal protein s16p | SAMN05444145_10950 | Not Available | Negative | 2995878 - 2996435 | 19740.4 |
| Trna-arg | Not Available | Not Available | Positive | 2996657 - 2996730 | Not Available |
| signal transduction histidine kinase | SAMN05444145_10952 | Not Available | Negative | 2996781 - 2998106 | 49702.9 |
| signal transduction histidine kinase | SAMN05444145_10953 | Not Available | Negative | 2998103 - 3000187 | 79633.7 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN05444145_10954 | Not Available | Negative | 3000285 - 3000665 | 14575.8 |
| peptidase family m23 | SAMN05444145_10955 | Not Available | Negative | 3000722 - 3002449 | 64118.1 |
| regulatory protein | SAMN05444145_10956 | Not Available | Negative | 3002434 - 3002946 | 19217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
