Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative binding domain-containing protein, n-terminal | SAMN05444145_10937 | Not Available | Negative | 2983395 - 2984648 | 46879.5 |
| glycyl-trna synthetase | SAMN05444145_10938 | Not Available | Positive | 2985008 - 2986552 | 59430.7 |
| putative holliday junction resolvase | SAMN05444145_10939 | Not Available | Positive | 2986554 - 2986967 | 15542.0 |
| peptide deformylase | SAMN05444145_10940 | Not Available | Positive | 2986964 - 2987509 | 20904.1 |
| trl-like protein family protein | SAMN05444145_10941 | Not Available | Positive | 2987517 - 2987819 | 10424.7 |
| hypothetical protein | SAMN05444145_10942 | Not Available | Positive | 2987863 - 2988333 | 17737.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_10943 | Not Available | Negative | 2988435 - 2988950 | 19300.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_10944 | Not Available | Negative | 2989160 - 2989621 | 16652.9 |
| pyruvate phosphate dikinase | SAMN05444145_10945 | Not Available | Negative | 2989805 - 2992534 | 99837.5 |
| hypothetical protein | SAMN05444145_10946 | Not Available | Negative | 2992698 - 2993513 | 31473.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
