Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cysteine desulfidase | SAMN05444145_10927 | Not Available | Positive | 2974268 - 2975554 | 45734.7 |
| histidine phosphatase superfamily (branch 2) | SAMN05444145_10928 | Not Available | Positive | 2975548 - 2976825 | 46754.0 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN05444145_10929 | Not Available | Negative | 2976904 - 2978130 | 47447.2 |
| putative endonuclease | SAMN05444145_10930 | Not Available | Negative | 2978253 - 2978618 | 13397.7 |
| prephenate dehydrogenase | SAMN05444145_10931 | Not Available | Negative | 2978618 - 2979460 | 30915.5 |
| dipeptidase e | SAMN05444145_10932 | Not Available | Negative | 2979481 - 2980182 | 25957.6 |
| acyl carrier protein | SAMN05444145_10933 | Not Available | Positive | 2980361 - 2980597 | 8636.15 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05444145_10934 | Not Available | Positive | 2980644 - 2981891 | 44336.4 |
| rnase iii | SAMN05444145_10935 | Not Available | Positive | 2981927 - 2982703 | 29811.3 |
| dna repair protein radc | SAMN05444145_10936 | Not Available | Positive | 2982705 - 2983322 | 22526.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
