Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna modification methylase | SAMN05444145_1097 | Not Available | Negative | 2958139 - 2959290 | 44957.4 |
| hypothetical protein | SAMN05444145_1098 | Not Available | Negative | 2959458 - 2959910 | 17501.5 |
| hypothetical protein | SAMN05444145_1099 | Not Available | Negative | 2959918 - 2960520 | 23480.2 |
| pd-(d/e)xk nuclease superfamily protein | SAMN05444145_10910 | Not Available | Negative | 2960517 - 2961383 | 33407.0 |
| helix-turn-helix domain-containing protein | SAMN05444145_10911 | Not Available | Negative | 2962145 - 2962405 | 10177.2 |
| site-specific recombinase xerd | SAMN05444145_10912 | Not Available | Negative | 2962389 - 2963636 | 48262.4 |
| dna polymerase-4 | SAMN05444145_10913 | Not Available | Positive | 2963985 - 2965019 | 38476.2 |
| protein of unknown function | SAMN05444145_10914 | Not Available | Negative | 2965027 - 2966034 | 38378.8 |
| hypothetical protein | SAMN05444145_10915 | Not Available | Positive | 2966137 - 2966571 | 16230.8 |
| hypothetical protein | SAMN05444145_10916 | Not Available | Negative | 2966424 - 2966762 | 12383.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
