Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_108132 | Not Available | Negative | 2944008 - 2946995 | 110644.0 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_108133 | Not Available | Negative | 2947035 - 2948573 | 55276.6 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_108134 | Not Available | Negative | 2948602 - 2949570 | 34737.1 |
| beta-galactosidase | SAMN05444145_108135 | Not Available | Negative | 2950533 - 2950754 | 8308.87 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_1091 | Not Available | Positive | 2950818 - 2953844 | 110612.0 |
| susd family protein | SAMN05444145_1092 | Not Available | Positive | 2953881 - 2955359 | 54208.1 |
| Trna-phe | Not Available | Not Available | Positive | 2955558 - 2955630 | Not Available |
| site-specific recombinase xerd | SAMN05444145_1094 | Not Available | Positive | 2955806 - 2956708 | 35267.6 |
| hypothetical protein | SAMN05444145_1095 | Not Available | Positive | 2956789 - 2957175 | 15420.8 |
| cfrbi restriction endonuclease | SAMN05444145_1096 | Not Available | Negative | 2957172 - 2958128 | 36672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
