Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_108122 | Not Available | Positive | 2926815 - 2930243 | 128122.0 |
| starch-binding associating with outer membrane | SAMN05444145_108123 | Not Available | Positive | 2930257 - 2932146 | 71784.9 |
| protein of unknown function | SAMN05444145_108124 | Not Available | Positive | 2932166 - 2932684 | 18842.5 |
| beta-glucosidase | SAMN05444145_108125 | Not Available | Positive | 2932702 - 2935164 | 90801.2 |
| xylose isomerase-like tim barrel | SAMN05444145_108126 | Not Available | Negative | 2935278 - 2936162 | 32220.6 |
| hypothetical protein | SAMN05444145_108127 | Not Available | Negative | 2936170 - 2936622 | 17172.1 |
| hypothetical protein | SAMN05444145_108128 | Not Available | Negative | 2936647 - 2938269 | 62968.8 |
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN05444145_108129 | Not Available | Negative | 2938365 - 2940605 | 85649.1 |
| calcineurin-like phosphoesterase | SAMN05444145_108130 | Not Available | Negative | 2940688 - 2942205 | 57181.4 |
| susd family protein | SAMN05444145_108131 | Not Available | Negative | 2942286 - 2943995 | 65034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
