Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_10892 | Not Available | Positive | 2891475 - 2892086 | 21822.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05444145_10893 | Not Available | Negative | 2892154 - 2893365 | 45564.3 |
| l-aspartate oxidase | SAMN05444145_10894 | Not Available | Positive | 2893447 - 2895003 | 57999.4 |
| peptide chain release factor 3 | SAMN05444145_10895 | Not Available | Positive | 2895007 - 2896590 | 59235.7 |
| hypothetical protein | SAMN05444145_10896 | Not Available | Negative | 2896648 - 2897364 | 26357.1 |
| l-lysine 2,3-aminomutase | SAMN05444145_10897 | Not Available | Negative | 2897416 - 2899530 | 80843.1 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05444145_10898 | Not Available | Negative | 2899795 - 2900385 | 22770.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05444145_10899 | Not Available | Negative | 2900395 - 2901594 | 44353.1 |
| glycosyl transferase family 2 | SAMN05444145_108100 | Not Available | Negative | 2901591 - 2902595 | 36801.7 |
| glycerol-3-phosphate cytidylyltransferase | SAMN05444145_108101 | Not Available | Negative | 2902592 - 2903740 | 43236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
