Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonyl hydrolase yesr | SAMN05444145_10882 | Not Available | Negative | 2877018 - 2878328 | 49627.5 |
| signal transduction histidine kinase | SAMN05444145_10883 | Not Available | Positive | 2878422 - 2882531 | 153471.0 |
| melibiase | SAMN05444145_10884 | Not Available | Positive | 2882606 - 2885098 | 93498.5 |
| chaperonin groel | SAMN05444145_10885 | Not Available | Negative | 2885185 - 2886816 | 57630.4 |
| chaperonin groes | SAMN05444145_10886 | Not Available | Negative | 2886829 - 2887098 | 9489.69 |
| Trna-his | Not Available | Not Available | Positive | 2887336 - 2887412 | Not Available |
| uncharacterized fe-s cluster protein yjdi | SAMN05444145_10888 | Not Available | Positive | 2887623 - 2887850 | 8475.33 |
| enolase | SAMN05444145_10889 | Not Available | Negative | 2887906 - 2889207 | 46376.2 |
| transporter, cpa2 family | SAMN05444145_10890 | Not Available | Positive | 2889488 - 2890672 | 43380.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_10891 | Not Available | Positive | 2890685 - 2891338 | 24600.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
