Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10872 | Not Available | Positive | 2859637 - 2860878 | 46018.9 |
| hypothetical protein | SAMN05444145_10873 | Not Available | Positive | 2860871 - 2862166 | 47522.8 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444145_10874 | Not Available | Positive | 2862174 - 2863277 | 40998.5 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444145_10875 | Not Available | Negative | 2863441 - 2864361 | 33609.9 |
| starch-binding associating with outer membrane | SAMN05444145_10876 | Not Available | Negative | 2864471 - 2866168 | 64805.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10877 | Not Available | Negative | 2866168 - 2869401 | 120765.0 |
| glycosyl hydrolase family 115 | SAMN05444145_10878 | Not Available | Negative | 2869434 - 2872199 | 102776.0 |
| hypothetical protein | SAMN05444145_10879 | Not Available | Negative | 2872206 - 2873405 | 42885.3 |
| heparinase ii/iii-like protein | SAMN05444145_10880 | Not Available | Negative | 2873685 - 2875616 | 71643.3 |
| cephalosporin-c deacetylase | SAMN05444145_10881 | Not Available | Negative | 2875709 - 2877007 | 49350.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
