Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | SAMN05444145_10842 | Not Available | Negative | 2819021 - 2821423 | 89846.4 |
| hypothetical protein | SAMN05444145_10843 | Not Available | Negative | 2821533 - 2824463 | 111066.0 |
| translation initiation factor 1 | SAMN05444145_10844 | Not Available | Negative | 2824465 - 2824812 | 12862.4 |
| hypothetical protein | SAMN05444145_10845 | Not Available | Negative | 2824939 - 2825877 | 34912.9 |
| protein of unknown function | SAMN05444145_10846 | Not Available | Positive | 2826085 - 2827182 | 42984.1 |
| aspartate kinase | SAMN05444145_10847 | Not Available | Negative | 2827258 - 2828514 | 46847.3 |
| prolyl oligopeptidase | SAMN05444145_10848 | Not Available | Negative | 2828780 - 2830915 | 79268.8 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN05444145_10849 | Not Available | Positive | 2831001 - 2831828 | 30113.3 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN05444145_10850 | Not Available | Positive | 2831831 - 2832550 | 27040.1 |
| glycine cleavage system h protein | SAMN05444145_10851 | Not Available | Positive | 2832635 - 2833012 | 13342.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
