Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit b | SAMN05444145_10832 | Not Available | Negative | 2810589 - 2811215 | 23400.2 |
| nadh dehydrogenase subunit a | SAMN05444145_10833 | Not Available | Negative | 2811236 - 2811586 | 13107.5 |
| hypothetical protein | SAMN05444145_10834 | Not Available | Negative | 2811685 - 2812044 | 12907.6 |
| superoxide dismutase, fe-mn family | SAMN05444145_10835 | Not Available | Negative | 2812226 - 2812876 | 24438.8 |
| rubredoxin | SAMN05444145_10836 | Not Available | Negative | 2812873 - 2813055 | 6934.01 |
| tyrosine phenol-lyase | SAMN05444145_10837 | Not Available | Positive | 2813181 - 2814560 | 51772.3 |
| sialate o-acetylesterase | SAMN05444145_10838 | Not Available | Positive | 2814567 - 2815994 | 52318.8 |
| site-specific recombinase xerd | SAMN05444145_10839 | Not Available | Negative | 2816035 - 2817243 | 46112.8 |
| hypothetical protein | SAMN05444145_10840 | Not Available | Negative | 2817365 - 2817817 | 16809.2 |
| aspartate semialdehyde dehydrogenase | SAMN05444145_10841 | Not Available | Negative | 2817897 - 2818889 | 36355.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
