Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN05444145_10812 | Not Available | Negative | 2785714 - 2786997 | 47433.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10813 | Not Available | Negative | 2787010 - 2790342 | 122640.0 |
| fecr family protein | SAMN05444145_10814 | Not Available | Negative | 2790418 - 2791440 | 39556.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_10815 | Not Available | Negative | 2791454 - 2792026 | 22443.4 |
| protein of unknown function | SAMN05444145_10816 | Not Available | Negative | 2792032 - 2793693 | 59037.4 |
| adp-heptose:lps heptosyltransferase | SAMN05444145_10817 | Not Available | Negative | 2793907 - 2794893 | 36480.5 |
| protein of unknown function | SAMN05444145_10818 | Not Available | Negative | 2794934 - 2795539 | 23775.2 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN05444145_10819 | Not Available | Positive | 2795615 - 2796619 | 38149.9 |
| hypothetical protein | SAMN05444145_10820 | Not Available | Positive | 2796638 - 2797324 | 26640.5 |
| dipeptidyl-peptidase-4 | SAMN05444145_10821 | Not Available | Positive | 2797479 - 2799611 | 81158.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
