Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | SAMN05444145_101174 | Not Available | Negative | 223565 - 224977 | 53045.9 |
| phosphoglucomutase | SAMN05444145_101175 | Not Available | Positive | 225205 - 226947 | 64656.2 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_101176 | Not Available | Negative | 227008 - 229227 | 82544.1 |
| alpha-n-acetylglucosaminidase | SAMN05444145_101177 | Not Available | Negative | 229231 - 231762 | 95017.8 |
| predicted acyltransferase | SAMN05444145_101178 | Not Available | Negative | 231759 - 232868 | 40328.1 |
| susd family protein | SAMN05444145_101179 | Not Available | Negative | 232891 - 234582 | 64333.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_101180 | Not Available | Negative | 234602 - 237778 | 117459.0 |
| fecr family protein | SAMN05444145_101181 | Not Available | Negative | 237955 - 238953 | 37496.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_101182 | Not Available | Negative | 239052 - 239642 | 23241.9 |
| hypothetical protein | SAMN05444145_101183 | Not Available | Positive | 239905 - 242646 | 93712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
