Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 2776525 - 2776602 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2776724 - 2776797 | Not Available |
| protein of unknown function | SAMN05444145_1084 | Not Available | Positive | 2776922 - 2778001 | 38887.4 |
| ferredoxin--nadp+ reductase | SAMN05444145_1085 | Not Available | Positive | 2778026 - 2778910 | 32325.2 |
| sulfide dehydrogenase (flavoprotein) subunit suda | SAMN05444145_1086 | Not Available | Positive | 2778914 - 2780299 | 49497.3 |
| lipocalin-like | SAMN05444145_1087 | Not Available | Positive | 2780312 - 2780881 | 19711.3 |
| predicted protein | SAMN05444145_1088 | Not Available | Positive | 2781045 - 2781887 | 30701.5 |
| hexosaminidase | SAMN05444145_1089 | Not Available | Negative | 2781966 - 2782895 | 35392.6 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_10810 | Not Available | Negative | 2782952 - 2784715 | 60537.9 |
| predicted protein | SAMN05444145_10811 | Not Available | Negative | 2784728 - 2785687 | 34576.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
