Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | SAMN05444145_107130 | Not Available | Positive | 2764259 - 2765836 | 58798.3 |
| polysaccharide deacetylase family protein, pep-cterm locus subfamily | SAMN05444145_107131 | Not Available | Negative | 2765938 - 2766786 | 32858.3 |
| acyltransferase family protein | SAMN05444145_107132 | Not Available | Negative | 2766792 - 2767742 | 36325.0 |
| predicted atp-dependent carboligase, atp-grasp superfamily | SAMN05444145_107133 | Not Available | Negative | 2767748 - 2768911 | 43993.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_107134 | Not Available | Negative | 2768908 - 2769990 | 41698.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_107135 | Not Available | Negative | 2770001 - 2771074 | 40441.6 |
| hypothetical protein | SAMN05444145_107136 | Not Available | Negative | 2771052 - 2772263 | 46573.0 |
| glycosyl transferases group 1 | SAMN05444145_107137 | Not Available | Negative | 2772395 - 2773450 | 40526.4 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05444145_107138 | Not Available | Negative | 2773468 - 2775009 | 57923.6 |
| site-specific recombinase xerd | SAMN05444145_1081 | Not Available | Negative | 2775193 - 2776410 | 47246.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
