Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05444145_107120 | Not Available | Negative | 2744246 - 2748202 | 148510.0 |
| hypothetical protein | SAMN05444145_107121 | Not Available | Positive | 2748405 - 2750246 | 68892.9 |
| hypothetical protein | SAMN05444145_107122 | Not Available | Positive | 2750257 - 2752116 | 69051.6 |
| glycosyl hydrolases family 43 | SAMN05444145_107123 | Not Available | Positive | 2752125 - 2753237 | 40800.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_107124 | Not Available | Positive | 2753294 - 2756371 | 114362.0 |
| starch-binding associating with outer membrane | SAMN05444145_107125 | Not Available | Positive | 2756375 - 2757982 | 61111.8 |
| major paralogous domain-containing protein | SAMN05444145_107126 | Not Available | Positive | 2758001 - 2759119 | 41648.0 |
| hypothetical protein | SAMN05444145_107127 | Not Available | Positive | 2759139 - 2760842 | 62061.5 |
| major paralogous domain-containing protein | SAMN05444145_107128 | Not Available | Positive | 2760854 - 2763001 | 78945.2 |
| lysophospholipase l1 | SAMN05444145_107129 | Not Available | Positive | 2763052 - 2764245 | 43521.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
