Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | SAMN05444145_107110 | Not Available | Negative | 2728092 - 2730923 | 103426.0 |
| glucokinase | SAMN05444145_107111 | Not Available | Negative | 2731001 - 2731915 | 31278.6 |
| mannose-6-phosphate isomerase, class i | SAMN05444145_107112 | Not Available | Negative | 2731896 - 2733755 | 70515.4 |
| l-arabinose isomerase | SAMN05444145_107113 | Not Available | Negative | 2733777 - 2735222 | 54513.2 |
| sugar phosphate permease | SAMN05444145_107114 | Not Available | Negative | 2735215 - 2736477 | 45950.1 |
| glycosyl hydrolases family 39 | SAMN05444145_107115 | Not Available | Negative | 2736493 - 2737965 | 54757.6 |
| transcriptional regulator, gntr family | SAMN05444145_107116 | Not Available | Positive | 2738127 - 2739161 | 39298.4 |
| surface polysaccharide o-acyltransferase, integral membrane enzyme | SAMN05444145_107117 | Not Available | Positive | 2739173 - 2740327 | 43598.5 |
| putative carbohydrate metabolism domain-containing protein | SAMN05444145_107118 | Not Available | Positive | 2740598 - 2743342 | 99546.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_107119 | Not Available | Positive | 2743360 - 2744187 | 31080.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
