Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transporter family protein | SAMN05444145_107100 | Not Available | Positive | 2709136 - 2711361 | 81677.9 |
| protein of unknown function | SAMN05444145_107101 | Not Available | Negative | 2711552 - 2711947 | 14779.6 |
| formate c-acetyltransferase | SAMN05444145_107102 | Not Available | Positive | 2712264 - 2714492 | 83708.8 |
| pyruvate formate lyase activating enzyme | SAMN05444145_107103 | Not Available | Positive | 2714522 - 2715220 | 25752.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_107104 | Not Available | Negative | 2715298 - 2716209 | 33944.2 |
| hypothetical protein | SAMN05444145_107105 | Not Available | Negative | 2716233 - 2719616 | 120271.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_107106 | Not Available | Positive | 2719905 - 2722982 | 113875.0 |
| starch-binding associating with outer membrane | SAMN05444145_107107 | Not Available | Positive | 2723007 - 2724893 | 71889.0 |
| hypothetical protein | SAMN05444145_107108 | Not Available | Positive | 2724967 - 2727126 | 81980.5 |
| hypothetical protein | SAMN05444145_107109 | Not Available | Positive | 2727129 - 2728076 | 35657.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
