Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444145_10780 | Not Available | Positive | 2688334 - 2688600 | 10289.5 |
| outer membrane protein ompa | SAMN05444145_10781 | Not Available | Negative | 2688651 - 2689853 | 43458.1 |
| ribonucleoside-diphosphate reductase class ii | SAMN05444145_10782 | Not Available | Negative | 2690032 - 2692584 | 95587.7 |
| endoribonuclease l-psp | SAMN05444145_10783 | Not Available | Negative | 2692773 - 2693147 | 13153.9 |
| heat shock protein hslj | SAMN05444145_10784 | Not Available | Positive | 2693223 - 2693651 | 15337.0 |
| malate dehydrogenase (nad) | SAMN05444145_10785 | Not Available | Negative | 2693724 - 2694722 | 36154.7 |
| dna replication and repair protein recr | SAMN05444145_10786 | Not Available | Negative | 2694795 - 2695397 | 22323.1 |
| sh3 domain-containing protein | SAMN05444145_10787 | Not Available | Negative | 2695398 - 2696210 | 30246.4 |
| oxygen tolerance | SAMN05444145_10788 | Not Available | Negative | 2696215 - 2698077 | 68462.6 |
| fumarase, class i, homodimeric | SAMN05444145_10789 | Not Available | Negative | 2698308 - 2699921 | 59353.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
