Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| neurotransmitter:na+ symporter, nss family | SAMN05444145_10770 | Not Available | Positive | 2670930 - 2672279 | 48570.1 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444145_10771 | Not Available | Positive | 2672656 - 2674074 | 53278.1 |
| calcineurin-like phosphoesterase | SAMN05444145_10772 | Not Available | Positive | 2674109 - 2676331 | 81556.3 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_10773 | Not Available | Positive | 2676350 - 2678950 | 92628.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10774 | Not Available | Positive | 2679021 - 2682362 | 123028.0 |
| starch-binding associating with outer membrane | SAMN05444145_10775 | Not Available | Positive | 2682374 - 2684008 | 60998.7 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_10776 | Not Available | Positive | 2684029 - 2685762 | 62564.6 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05444145_10777 | Not Available | Negative | 2685857 - 2686387 | 19310.1 |
| tetratricopeptide repeat-containing protein | SAMN05444145_10778 | Not Available | Negative | 2686401 - 2687084 | 24714.7 |
| dna replication and repair protein recf | SAMN05444145_10779 | Not Available | Positive | 2687123 - 2688313 | 44464.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
