Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | SAMN05444145_10760 | Not Available | Positive | 2659391 - 2659861 | 18115.3 |
| hypothetical protein | SAMN05444145_10761 | Not Available | Positive | 2660038 - 2661003 | 36128.9 |
| cmp-n-acetylneuraminic acid synthetase | SAMN05444145_10762 | Not Available | Positive | 2661017 - 2661670 | 24350.0 |
| hypothetical protein | SAMN05444145_10763 | Not Available | Negative | 2661674 - 2662555 | 33875.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_10764 | Not Available | Positive | 2662622 - 2663551 | 34306.1 |
| polyhydroxybutyrate depolymerase | SAMN05444145_10765 | Not Available | Positive | 2663565 - 2664416 | 31984.0 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05444145_10766 | Not Available | Negative | 2664447 - 2667044 | 96859.1 |
| dna polymerase iii, tau subunit | SAMN05444145_10767 | Not Available | Positive | 2667245 - 2669122 | 68166.8 |
| tyrosyl-trna synthetase | SAMN05444145_10768 | Not Available | Positive | 2669213 - 2670517 | 48880.9 |
| dihydroneopterin aldolase | SAMN05444145_10769 | Not Available | Positive | 2670519 - 2670872 | 13425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
