Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wg containing repeat-containing protein | SAMN05444145_10750 | Not Available | Positive | 2647794 - 2648972 | 43632.8 |
| protein of unknown function | SAMN05444145_10751 | Not Available | Positive | 2649013 - 2650743 | 63218.6 |
| hypothetical protein | SAMN05444145_10752 | Not Available | Positive | 2650752 - 2651609 | 31031.8 |
| wg containing repeat-containing protein | SAMN05444145_10753 | Not Available | Positive | 2651612 - 2652619 | 37374.9 |
| thioredoxin reductase (nadph) | SAMN05444145_10754 | Not Available | Positive | 2652662 - 2653585 | 32975.3 |
| ribonuclease z | SAMN05444145_10755 | Not Available | Positive | 2653582 - 2654505 | 34155.7 |
| rna methyltransferase, trmh family | SAMN05444145_10756 | Not Available | Positive | 2654502 - 2655257 | 27258.0 |
| hypothetical protein | SAMN05444145_10757 | Not Available | Negative | 2655363 - 2655701 | 12638.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | SAMN05444145_10758 | Not Available | Positive | 2656070 - 2657164 | 39289.8 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | SAMN05444145_10759 | Not Available | Positive | 2657251 - 2659203 | 74187.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
