Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine triad (hit) family protein | SAMN05444145_101164 | Not Available | Negative | 215518 - 215904 | 14496.6 |
| hypothetical protein | SAMN05444145_101165 | Not Available | Negative | 216011 - 216415 | 14859.2 |
| gtp pyrophosphokinase | SAMN05444145_101166 | Not Available | Negative | 216468 - 218687 | 84155.4 |
| recombination protein reca | SAMN05444145_101167 | Not Available | Negative | 218691 - 219704 | 36571.3 |
| peroxiredoxin q/bcp | SAMN05444145_101168 | Not Available | Negative | 219721 - 220185 | 17604.8 |
| hypothetical protein | SAMN05444145_101169 | Not Available | Negative | 220270 - 220482 | 8023.56 |
| acetyltransferase (gnat) family protein | SAMN05444145_101170 | Not Available | Negative | 220596 - 221447 | 32005.8 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN05444145_101171 | Not Available | Negative | 221458 - 221982 | 19408.0 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05444145_101172 | Not Available | Negative | 222023 - 222925 | 34731.5 |
| hypothetical protein | SAMN05444145_101173 | Not Available | Negative | 222927 - 223442 | 19094.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
