Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s18p | SAMN05444145_10740 | Not Available | Positive | 2633985 - 2634263 | 10765.4 |
| lsu ribosomal protein l9p | SAMN05444145_10741 | Not Available | Positive | 2634282 - 2634722 | 15657.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN05444145_10742 | Not Available | Negative | 2634828 - 2635745 | 32989.9 |
| dknyy family protein | SAMN05444145_10743 | Not Available | Negative | 2635842 - 2636570 | 26481.0 |
| ssu ribosomal protein s1p | SAMN05444145_10744 | Not Available | Negative | 2636712 - 2638547 | 68073.0 |
| 5'-nucleotidase | SAMN05444145_10745 | Not Available | Negative | 2638685 - 2640127 | 52663.1 |
| uridine kinase | SAMN05444145_10746 | Not Available | Positive | 2640197 - 2641867 | 63541.3 |
| uncharacterized membrane protein yccf, duf307 family | SAMN05444145_10747 | Not Available | Positive | 2642219 - 2643775 | 59705.6 |
| glycine dehydrogenase | SAMN05444145_10748 | Not Available | Positive | 2643957 - 2646782 | 102179.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN05444145_10749 | Not Available | Positive | 2647090 - 2647611 | 18389.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
