Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase | SAMN05444145_10730 | Not Available | Negative | 2624645 - 2625460 | 29613.7 |
| anthranilate phosphoribosyltransferase | SAMN05444145_10731 | Not Available | Negative | 2625466 - 2626461 | 36205.2 |
| anthranilate synthase component 2 | SAMN05444145_10732 | Not Available | Negative | 2626475 - 2627047 | 21061.5 |
| anthranilate synthase component 1 | SAMN05444145_10733 | Not Available | Negative | 2627065 - 2628465 | 52551.9 |
| tryptophan synthase beta chain | SAMN05444145_10734 | Not Available | Negative | 2628488 - 2629690 | 44124.9 |
| adenylate kinase | SAMN05444145_10735 | Not Available | Negative | 2630038 - 2630613 | 21330.6 |
| thiamine-phosphate kinase | SAMN05444145_10736 | Not Available | Positive | 2630711 - 2631748 | 36891.6 |
| hypothetical protein | SAMN05444145_10737 | Not Available | Negative | 2631871 - 2632443 | 20640.9 |
| hypothetical protein | SAMN05444145_10738 | Not Available | Negative | 2632465 - 2633256 | 28141.0 |
| ssu ribosomal protein s6p | SAMN05444145_10739 | Not Available | Positive | 2633637 - 2633981 | 13309.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
