Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10720 | Not Available | Positive | 2617987 - 2618499 | 19318.8 |
| hypothetical protein | SAMN05444145_10721 | Not Available | Positive | 2618533 - 2619033 | 18568.5 |
| site-specific recombinase xerd | SAMN05444145_10722 | Not Available | Negative | 2619101 - 2620324 | 46423.1 |
| Trna-pro | Not Available | Not Available | Positive | 2620464 - 2620538 | Not Available |
| iron complex transport system permease protein | SAMN05444145_10724 | Not Available | Positive | 2620797 - 2621798 | 34231.7 |
| iron complex transport system atp-binding protein | SAMN05444145_10725 | Not Available | Positive | 2621800 - 2622558 | 27611.5 |
| Trna-glu | Not Available | Not Available | Positive | 2622707 - 2622781 | Not Available |
| small subunit ribosomal protein s20 | SAMN05444145_10727 | Not Available | Positive | 2622923 - 2623174 | 9230.43 |
| tryptophan synthase, alpha chain | SAMN05444145_10728 | Not Available | Negative | 2623255 - 2624028 | 28385.1 |
| phosphoribosylanthranilate isomerase | SAMN05444145_10729 | Not Available | Negative | 2624031 - 2624648 | 22329.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
