Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsbd | SAMN05444145_106201 | Not Available | Negative | 2591684 - 2591826 | 5141.13 |
| sugar phosphate isomerase/epimerase | SAMN05444145_1071 | Not Available | Negative | 2591910 - 2592818 | 34790.4 |
| protein of unknown function | SAMN05444145_1072 | Not Available | Negative | 2592840 - 2594582 | 65005.7 |
| sugar phosphate isomerase/epimerase | SAMN05444145_1073 | Not Available | Negative | 2594698 - 2595546 | 30895.6 |
| major paralogous domain-containing protein | SAMN05444145_1074 | Not Available | Negative | 2595556 - 2596851 | 46657.9 |
| hypothetical protein | SAMN05444145_1075 | Not Available | Negative | 2596871 - 2597863 | 36766.6 |
| starch-binding associating with outer membrane | SAMN05444145_1076 | Not Available | Negative | 2597888 - 2599405 | 56604.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_1077 | Not Available | Negative | 2599451 - 2602792 | 124702.0 |
| fecr family protein | SAMN05444145_1078 | Not Available | Negative | 2602838 - 2603785 | 35460.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_1079 | Not Available | Negative | 2604139 - 2604507 | 14653.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
