Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | SAMN05444145_106191 | Not Available | Positive | 2584071 - 2584964 | 33932.7 |
| dihydrofolate reductase | SAMN05444145_106192 | Not Available | Positive | 2584970 - 2585449 | 18158.8 |
| heterodisulfide reductase subunit c | SAMN05444145_106193 | Not Available | Positive | 2585544 - 2586224 | 26028.1 |
| heterodisulfide reductase subunit b | SAMN05444145_106194 | Not Available | Positive | 2586227 - 2587318 | 41139.0 |
| heterodisulfide reductase subunit a | SAMN05444145_106195 | Not Available | Positive | 2587318 - 2588325 | 36656.3 |
| 4fe-4s dicluster domain-containing protein | SAMN05444145_106196 | Not Available | Positive | 2588328 - 2588663 | 12490.4 |
| fe-s oxidoreductase | SAMN05444145_106197 | Not Available | Positive | 2588666 - 2590447 | 66485.4 |
| Trna-met | Not Available | Not Available | Positive | 2590585 - 2590660 | Not Available |
| protein of unknown function | SAMN05444145_106199 | Not Available | Negative | 2590655 - 2591269 | 23376.7 |
| hypothetical protein | SAMN05444145_106200 | Not Available | Positive | 2591429 - 2591593 | 6231.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
