Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 28 | SAMN05444145_106171 | Not Available | Negative | 2548557 - 2549987 | 52272.5 |
| glycosyl hydrolases family 28 | SAMN05444145_106172 | Not Available | Negative | 2549984 - 2551519 | 55798.8 |
| protein of unknown function | SAMN05444145_106173 | Not Available | Negative | 2551521 - 2554667 | 119182.0 |
| iron(ii)-dependent oxidoreductase | SAMN05444145_106174 | Not Available | Negative | 2554695 - 2555795 | 40745.4 |
| ragb/susd domain-containing protein | SAMN05444145_106175 | Not Available | Negative | 2555818 - 2557374 | 59290.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_106176 | Not Available | Negative | 2557390 - 2560536 | 116680.0 |
| glycosyl hydrolases family 2 | SAMN05444145_106177 | Not Available | Negative | 2560670 - 2563651 | 110985.0 |
| two component regulator propeller | SAMN05444145_106178 | Not Available | Positive | 2563799 - 2567848 | 151320.0 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN05444145_106179 | Not Available | Positive | 2567940 - 2570309 | 89224.7 |
| glycosyl hydrolases family 2 | SAMN05444145_106180 | Not Available | Positive | 2570310 - 2572895 | 97465.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
