Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SAMN05444145_106151 | Not Available | Negative | 2516817 - 2518013 | 44809.1 |
| dna-binding protein hu-beta | SAMN05444145_106152 | Not Available | Negative | 2518037 - 2518297 | 9525.65 |
| Trna-ser | Not Available | Not Available | Positive | 2518470 - 2518557 | Not Available |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_106154 | Not Available | Negative | 2518866 - 2519402 | 20998.3 |
| beta-galactosidase | SAMN05444145_106155 | Not Available | Negative | 2519417 - 2522074 | 99737.8 |
| hypothetical protein | SAMN05444145_106156 | Not Available | Negative | 2522113 - 2523774 | 64650.9 |
| beta-glucosidase | SAMN05444145_106157 | Not Available | Negative | 2523776 - 2526016 | 81517.5 |
| hypothetical protein | SAMN05444145_106158 | Not Available | Negative | 2526036 - 2527430 | 51531.6 |
| hypothetical protein | SAMN05444145_106159 | Not Available | Negative | 2527435 - 2528784 | 50759.0 |
| starch-binding associating with outer membrane | SAMN05444145_106160 | Not Available | Negative | 2528847 - 2530739 | 70975.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
