Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_105236 | Not Available | Positive | 2228894 - 2229397 | 17516.3 |
| Structural protein | SAMN05444145_105237 | Not Available | Positive | 2229400 - 2230599 | 42567.9 |
| Tail tube | SAMN05444145_105238 | Not Available | Positive | 2230612 - 2231022 | 15034.0 |
| hypothetical protein | SAMN05444145_105239 | Not Available | Positive | 2231059 - 2231388 | 12246.7 |
| hypothetical protein | SAMN05444145_105240 | Not Available | Negative | 2231540 - 2231797 | 9592.59 |
| Tail length tape-measure protein | SAMN05444145_105241 | Not Available | Positive | 2231818 - 2233860 | 73030.8 |
| hypothetical protein | SAMN05444145_105242 | Not Available | Positive | 2233860 - 2234495 | 23722.5 |
| Structural protein | SAMN05444145_105243 | Not Available | Positive | 2234508 - 2235467 | 35932.8 |
| hypothetical protein | SAMN05444145_105244 | Not Available | Positive | 2235467 - 2236084 | 21644.6 |
| hypothetical protein | SAMN05444145_105245 | Not Available | Positive | 2236084 - 2236416 | 12016.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
